PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_00319.1_g00015.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family BES1
Protein Properties Length: 339aa    MW: 35820.9 Da    PI: 8.8938
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_00319.1_g00015.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822216.85.1e-67411712133
                   DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 
                              +++rkp+w+ErEnn+rRERrRRaiaakiy+GLRaqGny+lpk++DnneVlkALc eAGw+ve+DGttyrkg++p+  +e++g+sa+
  Sme2.5_00319.1_g00015.1  41 SGRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCVEAGWIVEPDGTTYRKGCRPT-PMEIGGTSAN 125
                              689************************************************************************.********** PP

                   DUF822  88 aspesslqsslkssalaspvesysaspksssfpspssldsislasa 133
                              ++p+ss + s+ ss++asp++sy++sp+sssfpsps+ d ++++++
  Sme2.5_00319.1_g00015.1 126 ITPSSSRNPSPPSSYFASPIPSYQPSPTSSSFPSPSRGDGNMSSHP 171
                              ***************************************9988755 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.9E-6241167IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MMWEGGGSPA AGGGGGGGEG EGGGGGGGGG AMGGGGSGGI SGRRKPSWRE RENNRRRERR  60
RRAIAAKIYS GLRAQGNYNL PKHCDNNEVL KALCVEAGWI VEPDGTTYRK GCRPTPMEIG  120
GTSANITPSS SRNPSPPSSY FASPIPSYQP SPTSSSFPSP SRGDGNMSSH PFAFLHNSIP  180
LSLPPLRISN SAPVTPPLSS PTRVPKQTFN LETLARESMS ALNIPFFAAS APTSPTRGQR  240
FTPATIPECD ESDSSTIDSG QWMSFQKYSS NGIPTSPTFN LMKPVAQRIP SNDMIIDKGK  300
SIEFDFENVS VKAAWEGEKI HEVGLDDLEL TLGSGSARM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14261RRKPSWRERENNRRRERRRR
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00237DAPTransfer from AT1G75080Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755160.0HG975516.1 Solanum lycopersicum chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004238228.10.0PREDICTED: protein BRASSINAZOLE-RESISTANT 1
SwissprotQ8S3071e-116BZR1_ARATH; Protein BRASSINAZOLE-RESISTANT 1
TrEMBLK4BV770.0K4BV77_SOLLC; Uncharacterized protein
STRINGSolyc04g079980.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28122454
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-105BES1 family protein